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Hamid Reza Hemmati,Mahdi Alizadeh,Alireza Kamali-Asl,Shapour Shirani.Journal of Biomedical Research,2017,31(6):548-558
Semi-automated carotid lumen segmentation in computedtomography angiography images
Received:August 10, 2016  Revised:October 08, 2016
DOI£º10.7555/JBR.31.20160107
Keywords£ºcomputed tomography angiography, carotid, atherosclerosis, centerline extraction, segmentation
Grant Program£º
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AuthorInstitution
Hamid Reza Hemmati Radiation Medicine Engineering Department, Shahid Beheshti University, Tehran 3113, Iran
Mahdi Alizadeh Department of Neurosurgery, Thomas Jefferson University Hospital, Philadelphia, PA19107, USA;Department of Radiology, Thomas Jefferson University Hospital, Philadelphia, PA 19107, USA
Alireza Kamali-Asl Radiation Medicine Engineering Department, Shahid Beheshti University, Tehran 3113, Iran
Shapour Shirani Department of Imaging, Tehran University of Medical Science, Tehran 3113, Iran
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Abstract £º
      Carotid artery stenosis causes narrowing of carotid lumens and may lead to brain infarction. The purpose of this study was to develop a semi-automated method of segmenting vessel walls, surrounding tissues, and more importantly, the carotid artery lumen by contrast computed tomography angiography (CTA) images and to define the severity of stenosis and present a three-dimensional model of the carotid for visual inspection. In vivo contrast CTA images of 14 patients (7 normal subjects and 7 patients undergoing endarterectomy) were analyzed using a multi-step segmentation algorithm. This method uses graph cut followed by watershed and Hessian based shortest path method in order to extract lumen boundary correctly without being corrupted in the presence of surrounding tissues. Quantitative measurements of the proposed method were compared with those of manual delineation by independent board-certified radiologists. The results were quantitatively evaluated using spatial overlap surface distance indices. A slightly strong match was shown in terms of dice similarity coefficient (DSC) = 0.87_x005f0.08; mean surface distance (Dmsd) = 0.320.32; root mean squared surface distance (Drmssd) = 0.490.54 and maximum surface distance (Dmax) = 2.142.08 between manual and automated segmentation of common, internal and external carotid arteries, carotid bifurcation and stenotic artery, respectively. Quantitative measurements showed that the proposed method has high potential to segment the carotid lumen and is robust to the changes of the lumen diameter and the shape of the stenosis area at the bifurcation site. The proposed method for CTA images provides a fast and reliable tool to quantify the severity of carotid artery stenosis.
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